STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO82736.1Conserved hypothetical protein; COGs: COG1242 Fe-S oxidoreductase; InterPro IPR005911:IPR006638:IPR007197; KEGG: fnu:FN1142 oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: C6JR15 Oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family. (307 aa)    
Predicted Functional Partners:
ADO83116.1
Radical SAM domain protein; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006158:IPR007197:IPR006638; KEGG: aoe:Clos_1831 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: C3WCD5 Radical SAM domain-containing protein; PFAM: Radical SAM superfamily; B12 binding domain.
   
 0.674
ADO82737.1
Putative transcriptional regulator; KEGG: cpr:CPR_0880 hypothetical protein; SPTR: Q0SUK2 Putative uncharacterized protein; PFAM: HTH domain.
       0.527
Your Current Organism:
Ilyobacter polytropus
NCBI taxonomy Id: 572544
Other names: I. polytropus DSM 2926, Ilyobacter polytropus DSM 2926, Ilyobacter polytropus str. DSM 2926, Ilyobacter polytropus strain DSM 2926
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.