STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO83472.1COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005122; KEGG: fnu:FN0901 DNA polymerase; SPTR: C3WCL4 DNA polymerase; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4. (193 aa)    
Predicted Functional Partners:
ADO83473.1
COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: fnu:FN0900 metal dependent hydrolase; SPTR: C6JNF3 Beta-lactamase superfamily metal-dependent hydrolase; PFAM: Metallo-beta-lactamase superfamily.
       0.796
ADO82645.1
COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424:IPR011344:IPR016027:IPR012340; KEGG: fnu:FN1304 single-strand DNA binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: C6JRG5 Single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb).
   
   0.529
ADO83191.1
Peptidase M22 glycoprotease; COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone; InterPro IPR000905; KEGG: fnu:FN0928 O-sialoglycoprotein endopeptidase; PFAM: peptidase M22 glycoprotease; SPTR: C6JNJ7 O-sialoglycoprotein endopeptidase; PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ.
  
    0.490
ADO83471.1
Protein of unknown function DUF28; COGs: COG0217 conserved hypothetical protein; InterPro IPR002876:IPR017856; KEGG: fnu:FN1661 hypothetical protein; PFAM: protein of unknown function DUF28; SPTR: C6JNF6 Putative uncharacterized protein; PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family.
       0.475
ADO83474.1
KEGG: hypothetical protein; SPTR: C6JMH6 Predicted protein.
       0.475
ADO82083.1
COGs: COG5016 Pyruvate/oxaloacetate carboxyltransferase; InterPro IPR000891:IPR013785:IPR003379; KEGG: efa:EF3317 oxaloacetate decarboxylase; PFAM: Conserved carboxylase region; pyruvate carboxyltransferase; PRIAM: Pyruvate carboxylase; SPTR: C6PSX5 Conserved carboxylase region; PFAM: HMGL-like; Conserved carboxylase domain.
  
    0.411
ADO82612.1
COGs: COG5016 Pyruvate/oxaloacetate carboxyltransferase; InterPro IPR000891:IPR003379:IPR013785; KEGG: efa:EF3317 oxaloacetate decarboxylase; PFAM: Conserved carboxylase region; pyruvate carboxyltransferase; PRIAM: Pyruvate carboxylase; SPTR: C6PSX5 Conserved carboxylase region; PFAM: HMGL-like; Conserved carboxylase domain.
  
    0.411
Your Current Organism:
Ilyobacter polytropus
NCBI taxonomy Id: 572544
Other names: I. polytropus DSM 2926, Ilyobacter polytropus DSM 2926, Ilyobacter polytropus str. DSM 2926, Ilyobacter polytropus strain DSM 2926
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.