STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE56360.1Small GTP-binding protein; KEGG: gsu:GSU1380 ferrous iron transport protein B; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain protein. (579 aa)    
Predicted Functional Partners:
ADE56361.1
PFAM: FeoA family protein.
  
  
 0.906
ADE57366.1
KEGG: dat:HRM2_42740 TroR; PFAM: FeoA family protein; iron dependent repressor; SMART: iron dependent repressor.
 
  
 0.804
ADE57368.1
PFAM: FeoA family protein; KEGG: dol:Dole_0343 FeoA family protein.
 
  
 0.788
rlmN
Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
     
 0.776
ADE57367.1
PFAM: FeoA family protein; KEGG: ade:Adeh_3291 hypothetical protein.
  
  
 0.536
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
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