STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE56628.1PFAM: protein of unknown function DUF214; KEGG: sat:SYN_01995 export ABC transporter permease protein. (407 aa)    
Predicted Functional Partners:
ADE56627.1
KEGG: sat:SYN_01994 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.999
ADE57447.1
ABC transporter related protein; KEGG: dps:DP1784 lipoprotein releasing system, ATP- binding protein (LolD); PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.994
ADE56626.1
Efflux transporter, RND family, MFP subunit; KEGG: sat:SYN_01993 periplasmic component of efflux system; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.990
ADE57466.1
KEGG: dat:HRM2_00700 ABC-type transporter, predicted ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.985
ADE56625.1
PFAM: outer membrane efflux protein; KEGG: sat:SYN_02462 type I secretion outer membrane protein.
 
 
 0.951
ADE57576.1
ABC transporter related protein; KEGG: ade:Adeh_0666 cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase.
    
 0.908
ADE56195.1
KEGG: sfu:Sfum_3901 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.902
ADE56218.1
KEGG: shl:Shal_3486 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.902
ADE56558.1
KEGG: dvu:DVU0105 glutamine ABC transporter, ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.902
ADE57894.1
KEGG: aeh:Mlg_2176 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.902
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.