STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE57135.1PFAM: Peptidase M23; KEGG: dde:Dde_2203 M24/M37 family peptidase. (310 aa)    
Predicted Functional Partners:
ADE57138.1
PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: ppd:Ppro_1142 tyrosine recombinase XerD; Belongs to the 'phage' integrase family.
  
  
 0.777
ADE57136.1
TIGRFAM: pyrimidine-nucleoside phosphorylase; KEGG: afw:Anae109_0662 pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; Glycosyl transferase, family 3-like.
       0.775
ADE57137.1
Inosine guanosine and xanthosine phosphorylase family; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
       0.775
ADE57134.1
PFAM: NUDIX hydrolase; KEGG: dat:HRM2_01950 MutT family protein, putative 78-dihydro-8-oxoguanine triphosphatase (8-oxo-dGTPase); Belongs to the Nudix hydrolase family.
       0.770
ADE57133.1
PFAM: translation initiation factor SUI1; KEGG: mxa:MXAN_6338 SUI1 family protein.
       0.753
ADE56898.1
Penicillin-binding protein, 1A family; KEGG: sat:SYN_00304 multimodular transpeptidase- transglycosylase; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase.
 
   
 0.665
ADE57139.1
PFAM: NUDIX hydrolase; KEGG: dal:Dalk_3009 NUDIX hydrolase.
     
 0.605
ADE57140.1
PFAM: Pyruvate/ketoisovalerate oxidoreductase; KEGG: dde:Dde_0046 2-oxoglutarate ferredoxin oxidoreductase, gamma subunit.
       0.578
ADE57141.1
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: dat:HRM2_10700 keto/isovalerate ferredoxin oxidoreductase, beta subunit.
       0.567
ADE56317.1
KEGG: dma:DMR_17570 penicillin-binding protein 1C; TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; Penicillin- binding domain protein; penicillin-binding protein transpeptidase.
  
     0.550
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
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