STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE57243.1PFAM: protein of unknown function UCP030771; KEGG: hap:HAPS_0605 putative RecA/RADA recombinase. (111 aa)    
Predicted Functional Partners:
ADE57241.1
KEGG: bph:Bphy_1891 hypothetical protein.
  
    0.841
ADE57245.1
Phage portal protein, lambda family; KEGG: sml:Smlt1869 putative portal protein B (gpb) (minor capsid protein B) [contains: protein B*]; TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda.
  
    0.819
ADE57238.1
KEGG: spe:Spro_4914 hypothetical protein.
       0.787
ADE57239.1
Hypothetical protein.
       0.787
ADE57240.1
KEGG: spe:Spro_4915 hypothetical protein.
       0.787
ADE57242.1
KEGG: spe:Spro_4916 hypothetical protein.
       0.787
ADE57237.1
PFAM: major tail tube protein; KEGG: spe:Spro_4913 major tail tube protein.
       0.771
ADE57244.1
PFAM: peptidase U35 phage prohead HK97; KEGG: bpy:Bphyt_1173 peptidase U35 phage prohead HK97.
       0.752
ADE57236.1
KEGG: spe:Spro_4912 hypothetical protein.
       0.751
ADE57247.1
PFAM: terminase GpA; KEGG: dvu:DVU2876 terminase, large subunit, putative.
  
    0.745
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.