STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE57775.1TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bpt:Bpet0285 oligopeptide ABC transporter, ATP-binding protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (333 aa)    
Predicted Functional Partners:
ADE57776.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_1183 putative permease of ABC transporter.
  
 0.996
ADE56918.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_0628 binding-protein-dependent transport systems inner membrane component.
  
 0.986
ADE57892.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dal:Dalk_0870 binding-protein-dependent transport systems inner membrane component.
  
 0.986
ADE56607.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: asa:ASA_2644 ABC-type dipeptide/oligopeptide/nickel transporter, permease component.
  
 0.983
ADE57777.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_3132 binding-protein-dependent transport systems inner membrane component.
 
 0.968
ADE56917.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_1184 dipeptide ABC transporter, permease protein.
 
 0.925
ADE57676.1
ABC transporter related protein; KEGG: dat:HRM2_17600 HTH-type transcriptional regulator; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     
0.897
ADE56793.1
ABC transporter related protein; KEGG: sat:SYN_00209 ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    
0.894
ADE57891.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_4405 binding-protein-dependent transport systems inner membrane component.
 
 0.878
ADE56608.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eta:ETA_13920 ABC transporter, permease protein.
 
 0.868
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.