STRINGSTRING
JG24_00080 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_00080" - Derived by automated computational analysis using gene prediction method: Protein Homology in Klebsiella pneumoniae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_00080Derived by automated computational analysis using gene prediction method- Protein Homology (154 aa)    
Predicted Functional Partners:
JG24_00085
Derived by automated computational analysis using gene prediction method- Protein Homology (775 aa)
     
 
  0.862
JG24_00090
Derived by automated computational analysis using gene prediction method- Protein Homology (420 aa)
              0.845
lapA
Lipopolysaccharide assembly protein A; Involved in the assembly of lipopolysaccharide (LPS) (102 aa)
   
          0.636
JG24_00100
Derived by automated computational analysis using gene prediction method- Protein Homology (108 aa)
              0.606
JG24_00095
Derived by automated computational analysis using gene prediction method- Protein Homology (164 aa)
              0.606
seqA
Negative modulator of initiation of replication; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated (182 aa)
   
     
  0.521
JG24_20720
DNA mismatch repair endonuclease MutH; MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; Derived by automated computational analysis using gene prediction method- Protein Homology (231 aa)
   
          0.500
JG24_13540
Cnu protein; YdgT; in E. coli, when complexed with H-NS or StpA binds a 26 base-pair DNA sequence of oriC; seems to play a role in optimizing the activity of oriC; non-essential; Hha protein paralog; in an hha mutant background, cnu is overexpressed and can compensate hha-induced phenotypes; Derived by automated computational analysis using gene prediction method- Protein Homology (71 aa)
       
 
  0.484
JG24_01610
With Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; Derived by automated computational analysis using gene prediction method- Protein Homology (67 aa)
   
 
 
  0.477
hemG
Catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX; Derived by automated computational analysis using gene prediction method- Protein Homology (177 aa)
   
          0.473
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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