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JG24_00085 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_00085" - Derived by automated computational analysis using gene prediction method: Protein Homology in Klebsiella pneumoniae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_00085Derived by automated computational analysis using gene prediction method- Protein Homology (775 aa)    
Predicted Functional Partners:
JG24_00080
Derived by automated computational analysis using gene prediction method- Protein Homology (154 aa)
     
 
  0.862
JG24_00090
Derived by automated computational analysis using gene prediction method- Protein Homology (420 aa)
              0.845
JG24_26575
ATP-dependent DNA helicase RecQ; Functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway; Derived by automated computational analysis using gene prediction method- Protein Homology (608 aa)
 
  0.798
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (930 aa)
   
 
  0.731
dnaG
DNA primase; Synthesizes RNA primers at the replication forks; Derived by automated computational analysis using gene prediction method- Protein Homology (581 aa)
   
   
  0.714
JG24_11075
DNA-invertase; Derived by automated computational analysis using gene prediction method- Protein Homology (192 aa)
     
   
  0.684
JG24_07100
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the FtsK/SpoIIIE/SftA family (1373 aa)
 
 
  0.677
JG24_00095
Derived by automated computational analysis using gene prediction method- Protein Homology (164 aa)
         
  0.674
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (329 aa)
     
 
  0.665
JG24_01610
With Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; Derived by automated computational analysis using gene prediction method- Protein Homology (67 aa)
           
  0.648
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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