STRINGSTRING
JG24_00870 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_00870" - Derived by automated computational analysis using gene prediction method: Protein Homology in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_00870Derived by automated computational analysis using gene prediction method- Protein Homology (520 aa)    
Predicted Functional Partners:
JG24_02275
Derived by automated computational analysis using gene prediction method- Protein Homology (277 aa)
 
        0.708
JG24_00620
Derived by automated computational analysis using gene prediction method- Protein Homology (277 aa)
 
        0.702
JG24_00860
Virulence-associated protein vagC; Derived by automated computational analysis using gene prediction method- Protein Homology (76 aa)
 
          0.679
JG24_00865
Derived by automated computational analysis using gene prediction method- Protein Homology (138 aa)
 
          0.676
JG24_02430
Cleaves origin of transfer and unwinds; oriT relaxase; Derived by automated computational analysis using gene prediction method- Protein Homology (1303 aa)
 
          0.609
JG24_01140
Cleaves origin of transfer and unwinds; oriT relaxase; Derived by automated computational analysis using gene prediction method- Protein Homology (1497 aa)
 
          0.601
JG24_02240
IncF plasmid conjugative transfer DNA-nicking and unwinding protein TraI; Cleaves origin of transfer and unwinds; oriT relaxase; Derived by automated computational analysis using gene prediction method- Protein Homology (1753 aa)
 
          0.599
JG24_01135
Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
   
          0.594
JG24_00495
Derived by automated computational analysis using gene prediction method- Protein Homology (215 aa)
   
          0.587
JG24_02435
Derived by automated computational analysis using gene prediction method- Protein Homology (241 aa)
   
          0.582
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
Server load: low (9%) [HD]