STRINGSTRING
JG24_00885 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_00885" - Derived by automated computational analysis using gene prediction method: Protein Homology in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_00885Derived by automated computational analysis using gene prediction method- Protein Homology (189 aa)    
Predicted Functional Partners:
JG24_00890
Derived by automated computational analysis using gene prediction method- Protein Homology (112 aa)
 
          0.834
JG24_00880
Derived by automated computational analysis using gene prediction method- Protein Homology (185 aa)
 
          0.684
galM
Aldose 1-epimerase; Mutarotase; catalyzes the conversion of beta-galactose to the alpha-anomer; links the metabolism of lactose and galactose; Derived by automated computational analysis using gene prediction method- Protein Homology (347 aa)
         
  0.608
proS
Proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction- proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as ’pretransfer’ editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated ’posttransfer’ editing and involves deacy [...] (572 aa)
           
  0.530
JG24_00910
Derived by automated computational analysis using gene prediction method- Protein Homology (280 aa)
   
          0.508
JG24_25170
COGs COG3558; Derived by automated computational analysis using gene prediction method- Protein Homology (156 aa)
 
          0.424
JG24_16425
Derived by automated computational analysis using gene prediction method- Protein Homology (234 aa)
   
          0.420
JG24_08275
Transcriptional regulator, TetR family; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)
   
          0.400
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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