STRINGSTRING
JG24_01130 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_01130" - Derived by automated computational analysis using gene prediction method: Protein Homology in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_01130Derived by automated computational analysis using gene prediction method- Protein Homology (194 aa)    
Predicted Functional Partners:
JG24_01135
Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
 
     
  0.904
JG24_01140
Cleaves origin of transfer and unwinds; oriT relaxase; Derived by automated computational analysis using gene prediction method- Protein Homology (1497 aa)
 
          0.868
JG24_01150
Type IV secretion system coupling protein; similar to F plasmid TraD; Derived by automated computational analysis using gene prediction method- Protein Homology (770 aa)
 
          0.802
JG24_02435
Derived by automated computational analysis using gene prediction method- Protein Homology (241 aa)
   
     
  0.785
JG24_02235
IncF plasmid conjugative transfer pilin acetylase TraX; Derived by automated computational analysis using gene prediction method- Protein Homology (241 aa)
   
     
  0.785
JG24_02430
Cleaves origin of transfer and unwinds; oriT relaxase; Derived by automated computational analysis using gene prediction method- Protein Homology (1303 aa)
   
          0.778
JG24_02240
IncF plasmid conjugative transfer DNA-nicking and unwinding protein TraI; Cleaves origin of transfer and unwinds; oriT relaxase; Derived by automated computational analysis using gene prediction method- Protein Homology (1753 aa)
   
          0.776
JG24_02455
Derived by automated computational analysis using gene prediction method- Protein Homology (216 aa)
   
          0.774
JG24_01290
IncF plasmid conjugative transfer pilus assembly protein TraE; Derived by automated computational analysis using gene prediction method- Protein Homology (188 aa)
   
          0.774
JG24_02215
Derived by automated computational analysis using gene prediction method- Protein Homology (216 aa)
   
          0.773
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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