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JG24_01220 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_01220" - IncF plasmid conjugative transfer pilus assembly protein TraU in Klebsiella pneumoniae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_01220IncF plasmid conjugative transfer pilus assembly protein TraU; Derived by automated computational analysis using gene prediction method- Protein Homology (329 aa)    
Predicted Functional Partners:
JG24_01215
IncF plasmid conjugative transfer protein TrbC; Derived by automated computational analysis using gene prediction method- Protein Homology (212 aa)
 
          0.963
JG24_01230
IncF plasmid conjugative transfer pilus assembly protein TraW; Derived by automated computational analysis using gene prediction method- Protein Homology (208 aa)
 
     
  0.940
JG24_01240
IncF plasmid conjugative transfer pilus assembly protein TraC; Similar to VirB4; Derived by automated computational analysis using gene prediction method- Protein Homology (879 aa)
 
     
  0.937
JG24_01210
IncF plasmid conjugative transfer protein TraN; TraN; TrhN; involved in stabilizing mating pairs during plasmid conjugation; F plasmid TraN appears to recognize OmpA in the recipient cell; Derived by automated computational analysis using gene prediction method- Protein Homology (651 aa)
 
     
  0.928
JG24_01195
Type IV secretion system pilus assembly protein; similar to F plasmid TraF; Derived by automated computational analysis using gene prediction method- Protein Homology (250 aa)
          0.864
JG24_01175
IncF plasmid conjugative transfer pilus assembly protein TraH; Derived by automated computational analysis using gene prediction method- Protein Homology (455 aa)
 
     
  0.861
JG24_01185
IncF plasmid conjugative transfer protein TrbB; Derived by automated computational analysis using gene prediction method- Protein Homology (185 aa)
 
          0.851
JG24_01170
IncF plasmid conjugative transfer protein TraG; Derived by automated computational analysis using gene prediction method- Protein Homology (949 aa)
 
     
  0.849
JG24_01225
Derived by automated computational analysis using gene prediction method- Protein Homology (129 aa)
              0.845
JG24_01280
IncF plasmid conjugative transfer pilus assembly protein TraB; Derived by automated computational analysis using gene prediction method- Protein Homology (474 aa)
 
          0.816
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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