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JG24_01405 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_01405" - PsiB protein in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_01405PsiB protein; Derived by automated computational analysis using gene prediction method- Protein Homology (143 aa)    
Predicted Functional Partners:
JG24_01400
PsiA protein; Derived by automated computational analysis using gene prediction method- Protein Homology (242 aa)
         
  0.857
JG24_01395
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (108 aa)
              0.852
JG24_01390
Derived by automated computational analysis using gene prediction method- Protein Homology (124 aa)
              0.675
JG24_28320
RelE/StbE replicon stabilization toxin; Derived by automated computational analysis using gene prediction method- Protein Homology (94 aa)
           
  0.600
JG24_02470
Derived by automated computational analysis using gene prediction method- Protein Homology (86 aa)
           
  0.529
JG24_01660
Derived by automated computational analysis using gene prediction method- Protein Homology (83 aa)
           
  0.529
JG24_01115
Derived by automated computational analysis using gene prediction method- Protein Homology (86 aa)
           
  0.529
xerD
Site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; Derived by automated computational analysis using gene prediction method- Protein Homology (298 aa)
           
  0.528
JG24_01515
Derived by automated computational analysis using gene prediction method- Protein Homology (233 aa)
           
  0.526
JG24_22440
COG1451- Predicted metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (166 aa)
           
  0.422
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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