STRINGSTRING
JG24_01560 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_01560" - Derived by automated computational analysis using gene prediction method: Protein Homology in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_01560Derived by automated computational analysis using gene prediction method- Protein Homology (264 aa)    
Predicted Functional Partners:
xerC
Site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; Derived by automated computational analysis using gene prediction method- Protein Homology (300 aa)
   
     
  0.748
JG24_20995
Type 1 fimbriae regulatory protein FimE; Inversion of on/off regulator of fimA; Derived by automated computational analysis using gene prediction method- Protein Homology (202 aa)
 
   
  0.638
JG24_00805
Chromosome (Plasmid) partitioning protein ParB; SopB; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ParB family (321 aa)
   
   
  0.619
JG24_22060
Derived by automated computational analysis using gene prediction method- Protein Homology (361 aa)
   
          0.614
JG24_20990
Type 1 fimbriae regulatory protein FimB; Derived by automated computational analysis using gene prediction method- Protein Homology (201 aa)
   
          0.606
JG24_07655
Derived by automated computational analysis using gene prediction method- Protein Homology (335 aa)
   
          0.584
JG24_01135
Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
   
          0.582
JG24_00765
Derived by automated computational analysis using gene prediction method- Protein Homology (142 aa)
   
          0.572
JG24_02435
Derived by automated computational analysis using gene prediction method- Protein Homology (241 aa)
   
          0.568
JG24_02235
IncF plasmid conjugative transfer pilin acetylase TraX; Derived by automated computational analysis using gene prediction method- Protein Homology (241 aa)
   
          0.564
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
Server load: low (10%) [HD]