STRINGSTRING
JG24_01935 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_01935" - Derived by automated computational analysis using gene prediction method: Protein Homology in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_01935Derived by automated computational analysis using gene prediction method- Protein Homology (380 aa)    
Predicted Functional Partners:
JG24_29970
Type IV fimbrial assembly protein PilC; Derived by automated computational analysis using gene prediction method- Protein Homology (401 aa)
 
   
  0.910
JG24_01930
Derived by automated computational analysis using gene prediction method- Protein Homology (272 aa)
 
     
  0.869
JG24_01940
Derived by automated computational analysis using gene prediction method- Protein Homology (88 aa)
              0.848
JG24_30235
Derived by automated computational analysis using gene prediction method- Protein Homology (404 aa)
 
   
  0.846
JG24_30190
Derived by automated computational analysis using gene prediction method- Protein Homology (266 aa)
 
   
  0.818
JG24_01925
Derived by automated computational analysis using gene prediction method- Protein Homology (155 aa)
              0.791
hofQ
Type IV pilus biogenesis protein PilQ; Outer membrane porin probably involved in uptake of extracellular double-stranded DNA; similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa; Derived by automated computational analysis using gene prediction method- Protein Homology (413 aa)
 
   
  0.777
JG24_01920
Derived by automated computational analysis using gene prediction method- Protein Homology (159 aa)
              0.716
JG24_30230
Derived by automated computational analysis using gene prediction method- Protein Homology (140 aa)
 
   
  0.601
JG24_23505
Derived by automated computational analysis using gene prediction method- Protein Homology (161 aa)
 
   
  0.593
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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