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JG24_02880 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_02880" - IncF plasmid conjugative transfer surface exclusion protein TraT in Klebsiella pneumoniae
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
JG24_02880IncF plasmid conjugative transfer surface exclusion protein TraT; Derived by automated computational analysis using gene prediction method- Protein Homology (243 aa)    
Predicted Functional Partners:
JG24_02865
IncF plasmid conjugative transfer pilus assembly protein TraH; Derived by automated computational analysis using gene prediction method- Protein Homology (456 aa)
 
          0.835
JG24_02870
IncF plasmid conjugative transfer protein TraG; Derived by automated computational analysis using gene prediction method- Protein Homology (949 aa)
 
          0.811
JG24_02885
Type IV secretion system coupling protein; similar to F plasmid TraD; Derived by automated computational analysis using gene prediction method- Protein Homology (768 aa)
 
          0.789
JG24_01175
IncF plasmid conjugative transfer pilus assembly protein TraH; Derived by automated computational analysis using gene prediction method- Protein Homology (455 aa)
 
          0.697
JG24_00495
Derived by automated computational analysis using gene prediction method- Protein Homology (215 aa)
 
          0.687
JG24_00470
IncF plasmid conjugative transfer pilus assembly protein TraC; Similar to VirB4; Derived by automated computational analysis using gene prediction method- Protein Homology (832 aa)
 
          0.687
JG24_30550
Similar to VirB4; Derived by automated computational analysis using gene prediction method- Protein Homology (879 aa)
 
          0.685
JG24_00520
IncF plasmid conjugative transfer pilus assembly protein TraC; Similar to VirB4; Derived by automated computational analysis using gene prediction method- Protein Homology (879 aa)
 
          0.685
JG24_01240
IncF plasmid conjugative transfer pilus assembly protein TraC; Similar to VirB4; Derived by automated computational analysis using gene prediction method- Protein Homology (879 aa)
 
          0.684
JG24_30515
Derived by automated computational analysis using gene prediction method- Protein Homology (118 aa)
   
          0.680
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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