STRINGSTRING
JG24_04075 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_04075" - Transcriptional regulator, DeoR family in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_04075Transcriptional regulator, DeoR family; Derived by automated computational analysis using gene prediction method- Protein Homology (231 aa)    
Predicted Functional Partners:
JG24_04070
Glyoxalase family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (121 aa)
 
        0.940
secD
Protein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (615 aa)
         
  0.504
secF
Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (323 aa)
              0.488
JG24_05155
Derived by automated computational analysis using gene prediction method- Protein Homology (113 aa)
   
          0.460
yajC
Member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; Derived by automated computational analysis using gene prediction method- Protein Homology (110 aa)
              0.440
JG24_16260
DNA-cytosine methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family (477 aa)
            0.414
tgt
Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1’ of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1’ of the ribose to form th [...] (375 aa)
              0.412
JG24_21640
Uncharacterized protein ygiV; Derived by automated computational analysis using gene prediction method- Protein Homology (289 aa)
 
          0.406
JG24_15850
Derived by automated computational analysis using gene prediction method- Protein Homology (329 aa)
     
        0.403
JG24_14060
VirK; Derived by automated computational analysis using gene prediction method- Protein Homology (302 aa)
     
        0.403
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
Server load: low (6%) [HD]