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JG24_04300 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_04300" - Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) in Klebsiella pneumoniae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_04300Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1); Derived by automated computational analysis using gene prediction method- Protein Homology (566 aa)    
Predicted Functional Partners:
cof
HMP-PP phosphatase; Catalyzes the hydrolysis of 4-amino-2-methyl-5- hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2- methyl-5-hydroxymethylpyrimidine phosphate (HMP-P) (272 aa)
 
     
  0.675
queC
7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)); Belongs to the QueC family (233 aa)
              0.649
JG24_13545
Putative membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (146 aa)
   
          0.569
JG24_05945
Hypothetical lipoprotein ybfN; Derived by automated computational analysis using gene prediction method- Protein Homology (110 aa)
   
          0.555
JG24_25330
Probable membrane protein YPO2654; Derived by automated computational analysis using gene prediction method- Protein Homology (150 aa)
   
          0.540
JG24_18870
Stationary phase inducible protein CsiE; Derived by automated computational analysis using gene prediction method- Protein Homology (425 aa)
   
          0.528
JG24_28035
UPF0379 protein yjfY; Derived by automated computational analysis using gene prediction method- Protein Homology (91 aa)
   
          0.523
JG24_15785
Putative exported protein; Derived by automated computational analysis using gene prediction method- Protein Homology (79 aa)
   
          0.492
JG24_29245
Derived by automated computational analysis using gene prediction method- Protein Homology (79 aa)
   
          0.480
JG24_03925
AroM protein; Derived by automated computational analysis using gene prediction method- Protein Homology (221 aa)
   
          0.479
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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