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cadB protein (Klebsiella pneumoniae) - STRING interaction network
"cadB" - Lysine/cadaverine antiporter membrane protein CadB in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
cadBLysine/cadaverine antiporter membrane protein CadB; Antiporter protein responsible for lysine import and cadaverine export; member of the lysine-dependent acid resistance system 4 (AR4); inner membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (444 aa)    
Predicted Functional Partners:
JG24_04830
Lysine decarboxylase, inducible; Constitutive; catalyzes the formation of cadaverine from lysine; Derived by automated computational analysis using gene prediction method- Protein Homology (715 aa)
 
  0.884
JG24_04820
Transcriptional activator of cad operon; Regulates the cadBA operon; Derived by automated computational analysis using gene prediction method- Protein Homology (526 aa)
 
     
  0.819
JG24_04835
Di/tripeptide permease YjdL; Derived by automated computational analysis using gene prediction method- Protein Homology (491 aa)
 
   
  0.674
JG24_03100
Constitutive; catalyzes the formation of cadaverine from lysine; Derived by automated computational analysis using gene prediction method- Protein Homology (717 aa)
 
  0.609
JG24_21500
Ornithine decarboxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (712 aa)
 
  0.528
JG24_03805
Derived by automated computational analysis using gene prediction method- Protein Homology (310 aa)
   
   
  0.500
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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