STRINGSTRING
JG24_05270 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_05270" - Derived by automated computational analysis using gene prediction method: Protein Homology in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_05270Derived by automated computational analysis using gene prediction method- Protein Homology (234 aa)    
Predicted Functional Partners:
JG24_05280
Derived by automated computational analysis using gene prediction method- Protein Homology (277 aa)
   
  0.965
JG24_05285
Derived by automated computational analysis using gene prediction method- Protein Homology (340 aa)
   
  0.962
JG24_05275
Derived by automated computational analysis using gene prediction method- Protein Homology (278 aa)
 
   
0.889
JG24_05290
Derived by automated computational analysis using gene prediction method- Protein Homology (522 aa)
 
     
  0.868
JG24_17030
Dipeptide transport system permease protein DppC (TC 3.A.1.5.2); Derived by automated computational analysis using gene prediction method- Protein Homology (301 aa)
   
  0.750
JG24_17035
Dipeptide transport system permease protein DppB (TC 3.A.1.5.2); Derived by automated computational analysis using gene prediction method- Protein Homology (345 aa)
   
  0.717
JG24_17040
Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2); Derived by automated computational analysis using gene prediction method- Protein Homology (540 aa)
 
     
  0.618
JG24_24430
Dipeptide transport system permease protein DppC (TC 3.A.1.5.2); Derived by automated computational analysis using gene prediction method- Protein Homology (300 aa)
   
  0.534
nikC
Nickel transporter permease NikC; With NikABDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method- Protein Homology (277 aa)
   
  0.518
JG24_05205
Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
   
  0.515
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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