STRINGSTRING
JG24_05390 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_05390" - D-ribose-binding protein in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_05390D-ribose-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (311 aa)    
Predicted Functional Partners:
JG24_05375
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1); Derived by automated computational analysis using gene prediction method- Protein Homology (355 aa)
 
  0.991
JG24_05380
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1); Derived by automated computational analysis using gene prediction method- Protein Homology (514 aa)
 
  0.984
JG24_05385
Putative lipoprotein; Derived by automated computational analysis using gene prediction method- Protein Homology (206 aa)
 
          0.927
JG24_05370
3-oxoacyl-[acyl-carrier protein] reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (265 aa)
 
 
      0.824
JG24_12265
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1); Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (336 aa)
   
  0.761
rbsC
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1); Functions to transport ribose at high affinity; forms a complex with RbsA2C2B; Derived by automated computational analysis using gene prediction method- Protein Homology (321 aa)
   
  0.739
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose (139 aa)
 
   
  0.720
JG24_04890
Derived by automated computational analysis using gene prediction method- Protein Homology (343 aa)
   
  0.687
JG24_27475
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1); Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (332 aa)
          0.628
JG24_05365
Short chain dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (261 aa)
 
 
      0.612
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
Server load: low (10%) [HD]