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JG24_05645 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_05645" - Co-activator of prophage gene expression IbrB in Klebsiella pneumoniae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_05645Co-activator of prophage gene expression IbrB; Derived by automated computational analysis using gene prediction method- Protein Homology (208 aa)    
Predicted Functional Partners:
JG24_05650
Co-activator of prophage gene expression IbrA; Derived by automated computational analysis using gene prediction method- Protein Homology (407 aa)
 
 
  0.988
JG24_05655
Putative LysR-family transcriptional regulator YbdO; Derived by automated computational analysis using gene prediction method- Protein Homology (310 aa)
 
          0.608
JG24_25405
Putative transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (140 aa)
   
          0.556
JG24_08685
Derived by automated computational analysis using gene prediction method- Protein Homology (4195 aa)
   
 
  0.500
JG24_25250
Putative secreted protein; Derived by automated computational analysis using gene prediction method- Protein Homology (96 aa)
   
 
      0.472
JG24_25460
Outer membrane protein/protective antigen OMA87; Derived by automated computational analysis using gene prediction method- Protein Homology (377 aa)
   
        0.449
JG24_28230
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (175 aa)
   
          0.430
bssR
BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing; Derived by automated computational analysis using gene prediction method- Protein Homology (127 aa)
   
          0.411
JG24_13850
Chloramphenicol acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (227 aa)
   
     
  0.410
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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