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JG24_05725 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_05725" - LysR-family transcriptional regulator YbeF in Klebsiella pneumoniae
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
JG24_05725LysR-family transcriptional regulator YbeF; Derived by automated computational analysis using gene prediction method- Protein Homology (298 aa)    
Predicted Functional Partners:
JG24_19360
Derived by automated computational analysis using gene prediction method- Protein Homology (299 aa)
   
          0.605
JG24_09395
Derived by automated computational analysis using gene prediction method- Protein Homology (79 aa)
   
        0.599
lipA
Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives (321 aa)
         
  0.583
JG24_24370
FIG005119- putative inner membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (65 aa)
   
          0.581
JG24_03860
Derived by automated computational analysis using gene prediction method- Protein Homology (100 aa)
   
          0.569
JG24_03865
Putative inner membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (67 aa)
   
          0.555
JG24_25410
Putative inner membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (120 aa)
   
          0.517
bssR
BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing; Derived by automated computational analysis using gene prediction method- Protein Homology (127 aa)
   
          0.507
JG24_11645
Multiple antibiotic resistance protein MarB; Derived by automated computational analysis using gene prediction method- Protein Homology (72 aa)
   
        0.506
JG24_24570
Uncharacterized lipoprotein YsaB; Derived by automated computational analysis using gene prediction method- Protein Homology (92 aa)
   
          0.483
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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