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chiP protein (Klebsiella pneumoniae) - STRING interaction network
"chiP" - Outer membrane porin involved in the transport of chitooligosaccharides in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPOuter membrane porin involved in the transport of chitooligosaccharides; Derived by automated computational analysis using gene prediction method- Protein Homology (467 aa)    
Predicted Functional Partners:
JG24_05945
Hypothetical lipoprotein ybfN; Derived by automated computational analysis using gene prediction method- Protein Homology (110 aa)
 
   
  0.921
JG24_07130
Anaerobic dimethyl sulfoxide reductase chain C; Derived by automated computational analysis using gene prediction method- Protein Homology (287 aa)
   
          0.608
JG24_11360
Anaerobic dimethyl sulfoxide reductase chain C; Derived by automated computational analysis using gene prediction method- Protein Homology (285 aa)
   
          0.603
JG24_23815
Uncharacterized protein; May function as a transcriptional regulator that controls feoABC expression (79 aa)
   
          0.597
zntR
Transcriptional regulator, MerR family; Mediates expression of the zinc export protein ZntA in response to high levels of zinc; member of MerR family of transcriptional regulators; Derived by automated computational analysis using gene prediction method- Protein Homology (141 aa)
   
     
  0.585
JG24_09375
Chitobiose-specific regulator ChbR, AraC family; Represses the celABCDF-ydjC operon involved in carbon uptake; Derived by automated computational analysis using gene prediction method- Protein Homology (279 aa)
   
          0.525
JG24_17635
Outer membrane protein C; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the Gram-negative porin family (370 aa)
   
     
  0.489
JG24_30135
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology (417 aa)
   
 
      0.480
JG24_14360
Derived by automated computational analysis using gene prediction method- Protein Homology (374 aa)
   
     
  0.465
JG24_04300
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1); Derived by automated computational analysis using gene prediction method- Protein Homology (566 aa)
   
          0.457
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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