STRINGSTRING
ompX protein (Klebsiella pneumoniae) - STRING interaction network
"ompX" - Outer membrane protein X in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompXOuter membrane protein X; OmpX; involved in cell adhesion; forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface; mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains; Derived by automated computational analysis using gene prediction method- Protein Homology (171 aa)    
Predicted Functional Partners:
flk
In Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system; lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm; inner membrane-anchored protein; Derived by automated computational analysis using gene prediction method- Protein Homology (326 aa)
   
          0.769
aaeB
P-hydroxybenzoic acid efflux pump subunit AaeB; Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell (655 aa)
   
 
      0.753
JG24_25020
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (199 aa)
   
          0.751
JG24_07410
Outer membrane protein A; OmpA is believed to be a porin, involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli, and it is known to play a role as a phage receptor, a mediator of F-factor dependent conjugation, and in maintaining the structural shape of the outer membrane; 3a; II*; G; d; Derived by automated computational analysis using gene prediction method- Protein Homology (358 aa)
   
 
  0.744
JG24_18795
Protein SseB; Enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I; Derived by automated computational analysis using gene prediction method- Protein Homology (258 aa)
   
          0.744
JG24_15860
Putative periplasmic or exported protein; Derived by automated computational analysis using gene prediction method- Protein Homology (112 aa)
   
          0.744
JG24_23755
IgaA- a membrane protein that prevents overactivation of the Rcs regulatory system; Derived by automated computational analysis using gene prediction method- Protein Homology (709 aa)
   
          0.740
JG24_04245
Hypothetical lipoprotein YajG; Derived by automated computational analysis using gene prediction method- Protein Homology (192 aa)
   
          0.729
JG24_15775
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (96 aa)
   
        0.722
JG24_29335
Lipoate-protein ligase A; Derived by automated computational analysis using gene prediction method- Protein Homology (215 aa)
   
          0.719
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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