STRINGSTRING
hspQ protein (Klebsiella pneumoniae) - STRING interaction network
"hspQ" - Heat shock protein HspQ in Klebsiella pneumoniae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hspQHeat shock protein HspQ; Involved in the degradation of certain denaturated proteins, including DnaA, during heat shock stress (105 aa)    
Predicted Functional Partners:
JG24_03060
Derived by automated computational analysis using gene prediction method- GeneMarkS+ (59 aa)
   
          0.700
JG24_07455
LSU m5C1962 methyltransferase RlmI; SAM-dependent;catalyzes the methylation of cytosine at position 1962 of the 23S rRNA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the methyltransferase superfamily (400 aa)
              0.666
JG24_01610
With Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; Derived by automated computational analysis using gene prediction method- Protein Homology (67 aa)
   
          0.653
JG24_14360
Derived by automated computational analysis using gene prediction method- Protein Homology (374 aa)
   
          0.648
JG24_27840
Potassium efflux system KefA protein / Small-conductance mechanosensitive channel; Derived by automated computational analysis using gene prediction method- Protein Homology (1109 aa)
   
          0.640
rffT
TDP-N-acetylfucosamine-lipid II N-acetylfucosaminyltransferase; Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA-Fuc4NAc (Lipid III), the third lipid-linked intermediate involved in ECA synthesis; Belongs to the glycosyltransferase 56 family (358 aa)
   
        0.633
JG24_01840
Derived by automated computational analysis using gene prediction method- Protein Homology (76 aa)
   
          0.628
JG24_17635
Outer membrane protein C; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the Gram-negative porin family (370 aa)
   
          0.623
JG24_04480
Haemolysin expression modulating protein; With Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; Derived by automated computational analysis using gene prediction method- Protein Homology (72 aa)
   
          0.617
JG24_10250
Outer membrane protein N; Allows for ions and hydrophilic solutes to cross the outer membrane; Derived by automated computational analysis using gene prediction method- Protein Homology (374 aa)
   
          0.612
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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