STRINGSTRING
JG24_08020 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_08020" - COG2110, Macro domain, possibly ADP-ribose binding module in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_08020COG2110, Macro domain, possibly ADP-ribose binding module; Interacts and inactivates RNase III during cold shock; Derived by automated computational analysis using gene prediction method- Protein Homology (175 aa)    
Predicted Functional Partners:
JG24_07110
FIG065221- Holliday junction DNA helicase; Derived by automated computational analysis using gene prediction method- Protein Homology (447 aa)
 
        0.785
cmk
Cytidylate kinase; Catalyzes the formation of (d)CDP from ATP and (d)CMP; Derived by automated computational analysis using gene prediction method- Protein Homology (227 aa)
 
        0.773
JG24_08025
Transcriptional regulator, TetR family; Derived by automated computational analysis using gene prediction method- Protein Homology (197 aa)
              0.636
JG24_08015
Inner membrane protein YcdZ; Derived by automated computational analysis using gene prediction method- Protein Homology (160 aa)
              0.507
JG24_21900
Derived by automated computational analysis using gene prediction method- Protein Homology (358 aa)
   
   
  0.441
JG24_07805
Derived by automated computational analysis using gene prediction method- Protein Homology (358 aa)
   
   
  0.441
JG24_17540
Derived by automated computational analysis using gene prediction method- Protein Homology (173 aa)
 
     
  0.427
JG24_08325
Modulates the activities of several enzymes which are inactive in their acetylated form; Derived by automated computational analysis using gene prediction method- Protein Homology (276 aa)
 
      0.419
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (930 aa)
   
        0.403
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
Server load: low (7%) [HD]