STRINGSTRING
JG24_08480 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_08480" - Derived by automated computational analysis using gene prediction method: Protein Homology in Klebsiella pneumoniae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_08480Derived by automated computational analysis using gene prediction method- Protein Homology (56 aa)    
Predicted Functional Partners:
JG24_08470
Derived by automated computational analysis using gene prediction method- Protein Homology (375 aa)
   
      0.695
JG24_08475
Derived by automated computational analysis using gene prediction method- Protein Homology (81 aa)
              0.676
dnaE
DNA-directed DNA polymerase; Catalyzes DNA-template-directed extension of the 3’- end of a DNA strand by one nucleotide at a time; main replicative polymerase; Derived by automated computational analysis using gene prediction method- Protein Homology (1160 aa)
   
 
  0.555
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (930 aa)
   
   
  0.541
JG24_25485
DNA polymerase III beta subunit; Binds the polymerase to DNA and acts as a sliding clamp; Derived by automated computational analysis using gene prediction method- Protein Homology (366 aa)
     
 
  0.538
JG24_15875
DNA polymerase III theta subunit; Derived by automated computational analysis using gene prediction method- Protein Homology (76 aa)
       
      0.497
ksgA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (273 aa)
   
   
  0.493
JG24_04535
DNA polymerase III subunits gamma and tau; Catalyzes the DNA-template-directed extension of the 3’-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta’ subunits to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method- Protein Homology (635 aa)
     
 
  0.433
JG24_08485
Derived by automated computational analysis using gene prediction method- Protein Homology (114 aa)
              0.407
guaA
GMP synthase (glutamine-hydrolyzing); Contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; Derived by automated computational analysis using gene prediction method- Protein Homology (525 aa)
   
   
  0.407
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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