STRINGSTRING
rnb protein (Klebsiella pneumoniae) - STRING interaction network
"rnb" - Exoribonuclease 2 in Klebsiella pneumoniae
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnbExoribonuclease 2; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3’ to 5’ direction (644 aa)    
Predicted Functional Partners:
JG24_09645
UPF0509 protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0509 family (59 aa)
              0.503
gpt
Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily (152 aa)
   
        0.489
JG24_22505
Inner membrane protein YqjE; Derived by automated computational analysis using gene prediction method- Protein Homology (132 aa)
   
          0.484
JG24_16580
UPF0265 protein YeeX; Derived by automated computational analysis using gene prediction method- Protein Homology (107 aa)
   
 
      0.468
JG24_19530
Derived by automated computational analysis using gene prediction method- Protein Homology (115 aa)
   
          0.445
JG24_26600
Cof protein, HD superfamily hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (266 aa)
 
          0.439
tusC
Protein TusC; Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions (119 aa)
   
          0.437
pcnB
Polymerase that creates the 3’ poly(A) tail found in some mRNA’s; Derived by automated computational analysis using gene prediction method- Protein Homology (453 aa)
     
 
  0.423
JG24_23550
tRNA 5-methylaminomethyl-2-thiouridine synthase TusD; In Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; Derived by automated computational analysis using gene prediction method- Protein Homology (128 aa)
   
          0.411
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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