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JG24_12260 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_12260" - ABC transporter, ATP-binding protein in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_12260ABC transporter, ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)    
Predicted Functional Partners:
JG24_12265
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1); Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (336 aa)
   
  0.963
JG24_12270
Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the metallo-dependent hydrolases superfamily. Phosphotriesterase family (359 aa)
 
          0.949
JG24_12275
Putative cytoplasmic protein; Derived by automated computational analysis using gene prediction method- Protein Homology (251 aa)
 
          0.942
JG24_12280
Acetylornithine deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology (380 aa)
 
          0.892
JG24_12245
Ribose ABC transporter, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1); Derived by automated computational analysis using gene prediction method- Protein Homology (317 aa)
 
      0.823
rbsC
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1); Functions to transport ribose at high affinity; forms a complex with RbsA2C2B; Derived by automated computational analysis using gene prediction method- Protein Homology (321 aa)
   
  0.666
JG24_12235
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (281 aa)
 
          0.656
JG24_05375
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1); Derived by automated computational analysis using gene prediction method- Protein Homology (355 aa)
   
  0.653
JG24_05610
Derived by automated computational analysis using gene prediction method- Protein Homology (329 aa)
 
        0.624
JG24_12285
TolA protein; Derived by automated computational analysis using gene prediction method- Protein Homology (142 aa)
 
          0.612
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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