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JG24_13255 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_13255" - Probable tonB-dependent receptor yncD in Klebsiella pneumoniae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_13255Probable tonB-dependent receptor yncD; Derived by automated computational analysis using gene prediction method- Protein Homology (701 aa)    
Predicted Functional Partners:
JG24_14885
Ferric siderophore transport system, periplasmic binding protein TonB; Derived by automated computational analysis using gene prediction method- Protein Homology (248 aa)
 
 
  0.777
JG24_13250
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (353 aa)
 
          0.690
JG24_14895
Derived by automated computational analysis using gene prediction method- Protein Homology (809 aa)
 
        0.640
JG24_30100
Glucose dehydrogenase, PQQ-dependent; Quinoprotein glucose dehydrogenase; catalyzes the formation of D-glucono-1,5-lactone from D-glucose and ubiquinone; Derived by automated computational analysis using gene prediction method- Protein Homology (796 aa)
 
        0.597
JG24_07945
Ferrous iron transport permease EfeU; Derived by automated computational analysis using gene prediction method- Protein Homology (276 aa)
   
   
  0.571
JG24_13480
Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone]; Derived by automated computational analysis using gene prediction method- Protein Homology (790 aa)
 
        0.559
JG24_05060
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (360 aa)
 
          0.465
JG24_24495
Outer membrane protein A; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ompA family (220 aa)
           
  0.459
JG24_08050
Acidic protein msyB; Derived by automated computational analysis using gene prediction method- Protein Homology (128 aa)
   
        0.456
JG24_06820
Derived by automated computational analysis using gene prediction method- Protein Homology (369 aa)
 
        0.445
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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