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oppD protein (Klebsiella pneumoniae) - STRING interaction network
"oppD" - Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppDOligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1); Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (337 aa)    
Predicted Functional Partners:
JG24_14935
Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1); With OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell; Derived by automated computational analysis using gene prediction method- Protein Homology (302 aa)
  0.995
oppB
Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1); Derived by automated computational analysis using gene prediction method- Protein Homology (306 aa)
  0.995
JG24_14925
With OppABCD is involved in the transport of oligopeptides; OppF and OppD are ATP-binding proteins; Derived by automated computational analysis using gene prediction method- Protein Homology (334 aa)
 
0.979
JG24_14945
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1); Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method- Protein Homology (544 aa)
  0.979
JG24_07485
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1); Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method- Protein Homology (541 aa)
  0.951
JG24_09815
Periplasmic Murein Peptide-Binding Protein MppA; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method- Protein Homology (538 aa)
  0.949
JG24_13885
Derived by automated computational analysis using gene prediction method- Protein Homology (315 aa)
 
  0.850
JG24_24430
Dipeptide transport system permease protein DppC (TC 3.A.1.5.2); Derived by automated computational analysis using gene prediction method- Protein Homology (300 aa)
 
  0.820
nikC
Nickel transporter permease NikC; With NikABDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method- Protein Homology (277 aa)
 
  0.786
JG24_12215
Derived by automated computational analysis using gene prediction method- Protein Homology (289 aa)
 
  0.782
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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