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cmoB protein (Klebsiella pneumoniae) - STRING interaction network
"cmoB" - tRNA U34 carboxymethyltransferase in Klebsiella pneumoniae
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmoBtRNA U34 carboxymethyltransferase; Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs (334 aa)    
Predicted Functional Partners:
JG24_16025
tRNA (Uridine-5-oxyacetic acid methyl ester) 34 synthase; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) (247 aa)
   
  0.982
JG24_16020
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (131 aa)
            0.889
JG24_16010
Nicotinamidase/isochorismatase family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (188 aa)
   
        0.586
JG24_16015
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (272 aa)
              0.577
JG24_07235
Derived by automated computational analysis using gene prediction method- Protein Homology (266 aa)
   
          0.477
apaH
Multifunctional fusion protein; Hydrolyzes diadenosine 5’,5’’’-P1,P4-tetraphosphate to yield ADP (282 aa)
     
      0.460
JG24_15845
Ren protein; Derived by automated computational analysis using gene prediction method- Protein Homology (217 aa)
     
      0.460
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (354 aa)
     
   
  0.435
truD
tRNA pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs (349 aa)
   
        0.430
bcp
Thiol peroxidase, Bcp-type; Bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine; Derived by automated computational analysis using gene prediction method- Protein Homology (156 aa)
   
   
  0.417
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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