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JG24_17990 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_17990" - DedD protein in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_17990DedD protein; Derived by automated computational analysis using gene prediction method- Protein Homology (231 aa)    
Predicted Functional Partners:
JG24_17995
Derived by automated computational analysis using gene prediction method- Protein Homology (422 aa)
 
   
  0.973
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA; Belongs to the AccD/PCCB family (306 aa)
   
   
  0.760
JG24_17985
Membrane protein required for colicin V production; Derived by automated computational analysis using gene prediction method- Protein Homology (162 aa)
 
        0.749
JG24_18580
Derived by automated computational analysis using gene prediction method- Protein Homology (344 aa)
   
        0.674
JG24_26115
Cell division protein FtsN; Derived by automated computational analysis using gene prediction method- Protein Homology (282 aa)
 
   
  0.659
JG24_17980
Amidophosphoribosyltransferase; Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; Derived by automated computational analysis using gene prediction method- Protein Homology (505 aa)
   
   
  0.617
JG24_23705
DamX, an inner membrane protein involved in bile resistance; Binds the septal ring; Derived by automated computational analysis using gene prediction method- Protein Homology (429 aa)
 
     
  0.616
JG24_21695
Type I secretion outer membrane protein, TolC; Derived by automated computational analysis using gene prediction method- Protein Homology (490 aa)
   
          0.610
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (270 aa)
   
   
  0.592
JG24_23165
FIG005080- Possible exported protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1265 aa)
   
          0.586
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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