STRINGSTRING
JG24_18280 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_18280" - LysR family transcriptional regulator YfeR in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_18280LysR family transcriptional regulator YfeR; Derived by automated computational analysis using gene prediction method- Protein Homology (308 aa)    
Predicted Functional Partners:
JG24_19965
Transcriptional regulatory protein; Derived by automated computational analysis using gene prediction method- Protein Homology (295 aa)
   
          0.700
JG24_18285
Putative cytochrome oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (332 aa)
              0.621
JG24_14495
Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
   
        0.521
JG24_05350
Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)
   
          0.505
JG24_26160
Putative transcriptional regulator (LysR family); Derived by automated computational analysis using gene prediction method- Protein Homology (302 aa)
   
          0.484
JG24_17375
Derived by automated computational analysis using gene prediction method- Protein Homology (310 aa)
   
          0.479
JG24_16735
Derived by automated computational analysis using gene prediction method- Protein Homology (296 aa)
   
          0.443
JG24_14810
Transcriptional activator protein LysR; Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)
   
          0.416
rcsA
Transcriptional regulatory protein RcsA; Component of the Rcs signaling system, which controls transcription of numerous genes. Binds to DNA to regulate expression of genes (207 aa)
   
          0.402
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
Server load: low (7%) [HD]