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gudD protein (Klebsiella pneumoniae) - STRING interaction network
"gudD" - Glucarate dehydratase in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gudDGlucarate dehydratase; Catalyzes the formation of 5-keto-4-deoxy-D-glucarate from glucarate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family (446 aa)    
Predicted Functional Partners:
garD
D-galactarate dehydratase; Catalyzes the formation of 5-dehydro-4-deoxy-D-glucarate from D-galactarate; Derived by automated computational analysis using gene prediction method- Protein Homology (523 aa)
 
 
  0.986
JG24_20225
D-glucarate permease; Derived by automated computational analysis using gene prediction method- Protein Homology (452 aa)
 
 
  0.964
JG24_20220
Glucarate dehydratase related protein YgcY; Derived by automated computational analysis using gene prediction method- Protein Homology (446 aa)
 
   
0.940
garL
5-keto-4-deoxy-D-glucarate aldolase; Catalyzes the reversible retro-aldol cleavage of both 5- keto-4-deoxy-D-glucarate and 2-keto-3-deoxy-D-glucarate to pyruvate and tartronic semialdehyde; Belongs to the HpcH/HpaI aldolase family. KDGluc aldolase subfamily (256 aa)
 
 
  0.932
garR
2-hydroxy-3-oxopropionate reductase; Catalyzes the reduction of tatronate semialdehyde to D- glycerate (296 aa)
   
  0.804
JG24_20210
Glycerate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (379 aa)
   
   
  0.699
JG24_29775
Probable glucarate transporter; Involved in the transport of galactonate; Derived by automated computational analysis using gene prediction method- Protein Homology (436 aa)
 
 
  0.688
JG24_11680
Derived by automated computational analysis using gene prediction method- Protein Homology (439 aa)
 
 
  0.649
JG24_22465
Altronate hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (495 aa)
 
   
  0.595
JG24_13175
Derived by automated computational analysis using gene prediction method- Protein Homology (436 aa)
 
 
  0.580
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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