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syd protein (Klebsiella pneumoniae) - STRING interaction network
"syd" - Protein Syd in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sydProtein Syd; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function (181 aa)    
Predicted Functional Partners:
JG24_07355
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (180 aa)
   
          0.764
JG24_25860
Galactoside O-acetyltransferase, probable YiiD; Derived by automated computational analysis using gene prediction method- Protein Homology (313 aa)
   
          0.759
queF
NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) (281 aa)
              0.753
pspB
Phage shock protein B; DNA-binding transcriptional regulator; acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding; Derived by automated computational analysis using gene prediction method- Protein Homology (74 aa)
   
          0.709
JG24_18070
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (93 aa)
   
          0.701
JG24_17890
UPF0208 membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (151 aa)
   
          0.693
JG24_26240
Putative inner membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (119 aa)
   
          0.691
seqA
Negative modulator of initiation of replication; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated (182 aa)
   
          0.686
yihI
Der GTPase-activating protein YihI; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis (168 aa)
   
     
  0.676
helD
DNA helicase; Catalyzes the ATP-dependent unwinding of duplex DNA in the 3’ to 5’ direction with respect to the bound single strand; Derived by automated computational analysis using gene prediction method- Protein Homology (684 aa)
   
          0.658
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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