STRINGSTRING
JG24_20800 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_20800" - Pectin degradation protein KdgF in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_20800Pectin degradation protein KdgF; Derived by automated computational analysis using gene prediction method- Protein Homology (108 aa)    
Predicted Functional Partners:
JG24_16115
Predicted 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (212 aa)
 
          0.719
JG24_20865
Oligogalacturonate lyase; Derived by automated computational analysis using gene prediction method- Protein Homology (391 aa)
 
          0.660
JG24_20795
Derived by automated computational analysis using gene prediction method- Protein Homology (237 aa)
              0.575
uxaB
Altronate oxidoreductase; Catalyzes the formation of D-tagaturonate from D-altronate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the mannitol dehydrogenase family. UxaB subfamily (483 aa)
 
          0.535
JG24_17390
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family (396 aa)
 
          0.498
JG24_22465
Altronate hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (495 aa)
 
          0.473
uxaC
Uronate isomerase; Catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; Derived by automated computational analysis using gene prediction method- Protein Homology (470 aa)
 
          0.433
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
Server load: low (10%) [HD]