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fimA protein (Klebsiella pneumoniae) - STRING interaction network
"fimA" - Type 1 fimbriae major subunit FimA in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fimAType 1 fimbriae major subunit FimA; Derived by automated computational analysis using gene prediction method- Protein Homology (182 aa)    
Predicted Functional Partners:
JG24_21015
Chaperone FimC; Derived by automated computational analysis using gene prediction method- Protein Homology (231 aa)
 
  0.962
JG24_21010
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (178 aa)
 
   
0.922
JG24_21020
Type 1 fimbriae anchoring protein FimD; Derived by automated computational analysis using gene prediction method- Protein Homology (871 aa)
 
  0.890
JG24_04800
Fimbrial subunit; Derived by automated computational analysis using gene prediction method- Protein Homology (341 aa)
   
     
  0.882
JG24_21035
Derived by automated computational analysis using gene prediction method- Protein Homology (301 aa)
 
     
  0.864
JG24_21030
Type 1 fimbrae adaptor subunit FimG; Derived by automated computational analysis using gene prediction method- Protein Homology (166 aa)
 
   
  0.858
JG24_11910
Fimbrial adhesin; Derived by automated computational analysis using gene prediction method- Protein Homology (334 aa)
   
     
  0.826
JG24_19450
Type 1 fimbriae anchoring protein FimD; Derived by automated computational analysis using gene prediction method- Protein Homology (837 aa)
 
  0.801
JG24_27760
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (847 aa)
 
  0.796
JG24_27385
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (859 aa)
 
  0.789
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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