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xerD protein (Klebsiella pneumoniae) - STRING interaction network
"xerD" - Site-specific tyrosine recombinase which cuts and rejoins DNA molecules in Klebsiella pneumoniae
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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xerDSite-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; Derived by automated computational analysis using gene prediction method- Protein Homology (298 aa)    
Predicted Functional Partners:
JG24_21175
5’-3’ single-stranded-DNA-specific exonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (577 aa)
 
   
  0.912
JG24_21180
Thiol-disulfide interchange protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process (237 aa)
 
        0.885
JG24_08295
Transcription-repair coupling factor; Derived by automated computational analysis using gene prediction method- Protein Homology (1148 aa)
 
 
 
  0.741
JG24_07100
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the FtsK/SpoIIIE/SftA family (1373 aa)
 
 
 
  0.710
ruvA
Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB (203 aa)
 
   
  0.700
argR
Arginine repressor; Regulates arginine biosynthesis genes (156 aa)
           
  0.672
JG24_21190
Flavodoxin; Low-potential electron donor to a number of redox enzymes (173 aa)
              0.672
xerC
Site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; Derived by automated computational analysis using gene prediction method- Protein Homology (300 aa)
   
 
0.642
JG24_20020
DNA mismatch repair protein MutS; This protein performs the mismatch recognition step during the DNA repair process; Derived by automated computational analysis using gene prediction method- Protein Homology (853 aa)
         
  0.635
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (201 aa)
 
   
  0.608
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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