STRINGSTRING
sprT protein (Klebsiella pneumoniae) - STRING interaction network
"sprT" - Protein SprT in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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[Homology]
Score
sprTProtein SprT; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SprT family (166 aa)    
Predicted Functional Partners:
JG24_21400
Derived by automated computational analysis using gene prediction method- Protein Homology (235 aa)
         
  0.903
mazG
Nucleoside triphosphate pyrophosphohydrolase MazG; Functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; Derived by automated computational analysis using gene prediction method- Protein Homology (263 aa)
     
   
  0.690
JG24_21390
Arabinose-proton symporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family (464 aa)
   
        0.626
JG24_16040
Protein yecM; Derived by automated computational analysis using gene prediction method- Protein Homology (189 aa)
   
          0.618
lapA
Lipopolysaccharide assembly protein A; Involved in the assembly of lipopolysaccharide (LPS) (102 aa)
   
          0.602
JG24_21405
Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (243 aa)
         
  0.601
JG24_18995
Anti-sigma-E factor RseA; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish de [...] (216 aa)
   
          0.541
JG24_05805
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (556 aa)
           
  0.528
JG24_21755
Arylsulfatase; Derived by automated computational analysis using gene prediction method- Protein Homology (206 aa)
   
          0.519
tusC
Protein TusC; Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions (119 aa)
   
          0.490
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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