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JG24_23330 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_23330" - Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake in Klebsiella pneumoniae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_23330Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake; Derived by automated computational analysis using gene prediction method- Protein Homology (374 aa)    
Predicted Functional Partners:
tsaC
Threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-)/CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate (190 aa)
 
        0.950
smg
Protein Smg; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the Smg family (157 aa)
   
        0.882
JG24_07195
Derived by automated computational analysis using gene prediction method- Protein Homology (754 aa)
 
   
  0.868
JG24_23320
Similar to C-terminal Zn-finger domain of DNA topoisomerase I; Derived by automated computational analysis using gene prediction method- Protein Homology (180 aa)
            0.862
aroE
Shikimate dehydrogenase (NADP(+)); Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) (272 aa)
              0.823
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus (315 aa)
 
          0.794
JG24_23830
Required for utilization of DNA as the sole source of carbon and energy; Derived by automated computational analysis using gene prediction method- Protein Homology (224 aa)
 
   
  0.784
JG24_19210
DNA repair protein RecN; Derived by automated computational analysis using gene prediction method- Protein Homology (553 aa)
 
   
  0.784
JG24_26305
MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein; Among the AAA+ ATPases, the YifB protease family belongs to the Helix 2 insert clade; unknown function; Derived by automated computational analysis using gene prediction method- Protein Homology (506 aa)
 
  0.780
JG24_23305
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (85 aa)
              0.772
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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