STRINGSTRING
JG24_23730 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_23730" - Derived by automated computational analysis using gene prediction method: Protein Homology in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_23730Derived by automated computational analysis using gene prediction method- Protein Homology (142 aa)    
Predicted Functional Partners:
JG24_23740
Derived by automated computational analysis using gene prediction method- Protein Homology (266 aa)
 
          0.954
JG24_23725
Derived by automated computational analysis using gene prediction method- Protein Homology (126 aa)
 
          0.942
JG24_23735
Derived by automated computational analysis using gene prediction method- Protein Homology (177 aa)
 
          0.933
hofQ
Type IV pilus biogenesis protein PilQ; Outer membrane porin probably involved in uptake of extracellular double-stranded DNA; similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa; Derived by automated computational analysis using gene prediction method- Protein Homology (413 aa)
 
          0.865
JG24_11645
Multiple antibiotic resistance protein MarB; Derived by automated computational analysis using gene prediction method- Protein Homology (72 aa)
   
          0.772
bssR
BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing; Derived by automated computational analysis using gene prediction method- Protein Homology (127 aa)
   
          0.755
JG24_25250
Putative secreted protein; Derived by automated computational analysis using gene prediction method- Protein Homology (96 aa)
   
          0.754
JG24_20675
Derived by automated computational analysis using gene prediction method- Protein Homology (107 aa)
   
          0.753
JG24_24475
Putative lipase; Derived by automated computational analysis using gene prediction method- Protein Homology (214 aa)
   
          0.748
JG24_03860
Derived by automated computational analysis using gene prediction method- Protein Homology (100 aa)
   
          0.747
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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