STRINGSTRING
xylF protein (Klebsiella pneumoniae) - STRING interaction network
"xylF" - Xylose ABC transporter, periplasmic xylose-binding protein XylF in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylFXylose ABC transporter, periplasmic xylose-binding protein XylF; Periplasmic substrate-binding component of the ATP-dependent xylose transport system; high affinity; Derived by automated computational analysis using gene prediction method- Protein Homology (331 aa)    
Predicted Functional Partners:
JG24_24610
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1); Derived by automated computational analysis using gene prediction method- Protein Homology (393 aa)
 
  0.992
JG24_24605
D-xylose transport ATP-binding protein XylG; With XylFH is part of the high affinity xylose ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (513 aa)
 
 
  0.980
JG24_24615
Xylose activator XylR (AraC family); Derived by automated computational analysis using gene prediction method- Protein Homology (392 aa)
 
     
  0.863
JG24_28570
Xylose isomerase; Catalyzes the interconversion of D-xylose to D-xylulose; Derived by automated computational analysis using gene prediction method- Protein Homology (439 aa)
 
 
  0.753
JG24_24595
Xylose isomerase; Catalyzes the interconversion of D-xylose to D-xylulose; Derived by automated computational analysis using gene prediction method- Protein Homology (440 aa)
 
 
  0.752
JG24_24590
Catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose; Derived by automated computational analysis using gene prediction method- Protein Homology (484 aa)
 
     
  0.677
JG24_17060
Xylulose kinase; Catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose; Derived by automated computational analysis using gene prediction method- Protein Homology (487 aa)
 
     
  0.618
JG24_28215
Membrane component of a putative sugar ABC transporter system; Derived by automated computational analysis using gene prediction method- Protein Homology (332 aa)
          0.574
JG24_28210
Putative sugar ABC transport system, permease protein YtfT; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (341 aa)
          0.556
gshA
Glutamate--cysteine ligase; Involved in the first step of glutathione biosynthesis; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily (518 aa)
           
  0.549
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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