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JG24_24610 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_24610" - Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) in Klebsiella pneumoniae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
JG24_24610Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1); Derived by automated computational analysis using gene prediction method- Protein Homology (393 aa)    
Predicted Functional Partners:
JG24_24605
D-xylose transport ATP-binding protein XylG; With XylFH is part of the high affinity xylose ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (513 aa)
 
  0.993
xylF
Xylose ABC transporter, periplasmic xylose-binding protein XylF; Periplasmic substrate-binding component of the ATP-dependent xylose transport system; high affinity; Derived by automated computational analysis using gene prediction method- Protein Homology (331 aa)
 
  0.992
JG24_24615
Xylose activator XylR (AraC family); Derived by automated computational analysis using gene prediction method- Protein Homology (392 aa)
 
     
  0.779
araG
Arabinose import ATP-binding protein AraG; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family (504 aa)
   
  0.775
JG24_28205
Putative sugar ABC transport system, ATP-binding protein YtfR; Derived by automated computational analysis using gene prediction method- Protein Homology (500 aa)
   
  0.753
JG24_25715
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1); Derived by automated computational analysis using gene prediction method- Protein Homology (501 aa)
   
  0.741
JG24_04885
Inositol transport system ATP-binding protein; With RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; Derived by automated computational analysis using gene prediction method- Protein Homology (494 aa)
   
  0.733
JG24_26020
Predicted L-rhamnose ABC transporter, ATP-binding component; Derived by automated computational analysis using gene prediction method- Protein Homology (503 aa)
   
  0.721
JG24_27480
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1); With RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; Derived by automated computational analysis using gene prediction method- Protein Homology (506 aa)
   
  0.719
JG24_05520
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1); Derived by automated computational analysis using gene prediction method- Protein Homology (500 aa)
   
  0.697
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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