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JG24_25945 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_25945" - Derived by automated computational analysis using gene prediction method: Protein Homology in Klebsiella pneumoniae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_25945Derived by automated computational analysis using gene prediction method- Protein Homology (197 aa)    
Predicted Functional Partners:
JG24_25940
Ascorbate-specific PTS system, EIIA component; Derived by automated computational analysis using gene prediction method- Protein Homology (145 aa)
 
          0.898
JG24_25915
6-phosphofructokinase; Derived by automated computational analysis using gene prediction method- Protein Homology (326 aa)
 
   
  0.893
JG24_25920
Putative sugar phosphotransferase component II B; Derived by automated computational analysis using gene prediction method- Protein Homology (104 aa)
 
          0.863
JG24_25935
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (89 aa)
              0.837
rpmJ
50S ribosomal protein L36; Smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; Derived by automated computational analysis using gene prediction method- Protein Homology (46 aa)
   
   
  0.788
JG24_25925
Putative integral membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (455 aa)
 
          0.774
JG24_25930
Tagatose 1,6-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method- Protein Homology (280 aa)
 
   
  0.768
rplO
50S ribosomal protein L15; Binds to the 23S rRNA (144 aa)
   
   
  0.757
rplX
50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit (104 aa)
   
   
  0.714
rplV
50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome (110 aa)
   
   
  0.680
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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