STRINGSTRING
rhaT protein (Klebsiella pneumoniae) - STRING interaction network
"rhaT" - L-rhamnose-proton symporter in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhaTL-rhamnose-proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system) (344 aa)    
Predicted Functional Partners:
JG24_26050
L-rhamnose operon transcriptional activator RhaR; Activates the expression of rhaRS in response to L-rhamnose; Derived by automated computational analysis using gene prediction method- Protein Homology (281 aa)
 
   
  0.884
JG24_26040
Rhamnulokinase; Derived by automated computational analysis using gene prediction method- Protein Homology (488 aa)
 
   
  0.880
rhaA
L-rhamnose isomerase; Catalyzes the formation of L-rhamnulose from L-rhamnose; Derived by automated computational analysis using gene prediction method- Protein Homology (419 aa)
 
   
  0.863
rhaD
Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1- phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde (276 aa)
 
   
  0.836
rhaM
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose (104 aa)
 
   
  0.808
JG24_26045
L-rhamnose operon regulatory protein RhaS; Derived by automated computational analysis using gene prediction method- Protein Homology (278 aa)
 
   
  0.777
JG24_13135
L-rhamnose operon regulatory protein RhaS; Derived by automated computational analysis using gene prediction method- Protein Homology (274 aa)
 
   
  0.572
JG24_16055
Rhamnogalacturonide transporter RhiT; Derived by automated computational analysis using gene prediction method- Protein Homology (527 aa)
   
          0.535
putA
Transcriptional regulator; Proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1320 aa)
           
  0.528
adhP
Alcohol dehydrogenase; Similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs; Derived by automated computational analysis using gene prediction method- Protein Homology (336 aa)
       
 
  0.527
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
Server load: low (8%) [HD]