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JG24_26560 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_26560" - Protein rarD in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_26560Protein rarD; Derived by automated computational analysis using gene prediction method- Protein Homology (297 aa)    
Predicted Functional Partners:
JG24_26565
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (154 aa)
   
        0.771
JG24_26575
ATP-dependent DNA helicase RecQ; Functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway; Derived by automated computational analysis using gene prediction method- Protein Homology (608 aa)
              0.472
JG24_26570
Phospholipase A1, Outer membrane phospholipase A; Catalyzes the hydrolysis of phosphatidylcholine; Derived by automated computational analysis using gene prediction method- Protein Homology (286 aa)
              0.471
JG24_11295
Spermidine export protein MdtJ; Catalyzes the excretion of spermidine (120 aa)
           
  0.452
JG24_26580
L-lysine permease; Derived by automated computational analysis using gene prediction method- Protein Homology (206 aa)
              0.416
JG24_10255
Pyruvate-flavodoxin oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (1175 aa)
              0.400
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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