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JG24_27560 protein (Klebsiella pneumoniae) - STRING interaction network
"JG24_27560" - Melibiose operon regulatory protein in Klebsiella pneumoniae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JG24_27560Melibiose operon regulatory protein; Derived by automated computational analysis using gene prediction method- Protein Homology (312 aa)    
Predicted Functional Partners:
JG24_27565
Alpha-galactosidase; Catalyses the hydrolysis of terminal non-reducing alpha-D-galactose residues in alpha-D-galactosides; Derived by automated computational analysis using gene prediction method- Protein Homology (450 aa)
 
   
  0.849
JG24_27570
Melibiose carrier protein, Na+/melibiose symporter; Derived by automated computational analysis using gene prediction method- Protein Homology (471 aa)
 
          0.753
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (329 aa)
     
      0.534
JG24_26045
L-rhamnose operon regulatory protein RhaS; Derived by automated computational analysis using gene prediction method- Protein Homology (278 aa)
   
 
 
  0.530
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (613 aa)
       
      0.525
JG24_22260
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (210 aa)
   
          0.511
JG24_25160
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (301 aa)
 
 
 
  0.479
JG24_25250
Putative secreted protein; Derived by automated computational analysis using gene prediction method- Protein Homology (96 aa)
   
          0.415
JG24_10600
Derived by automated computational analysis using gene prediction method- Protein Homology (130 aa)
   
          0.412
Your Current Organism:
Klebsiella pneumoniae
NCBI taxonomy Id: 573
Other names: ATCC 13883, Bacillus pneumoniae, Bacterium pneumoniae crouposae, CCUG 225, CIP 82.91, DSM 30104, HAMBI 450, Hyalococcus pneumoniae, IFO 14940, K. pneumoniae, Klebsiella pneumoniae, Klebsiella sp. M-AI-2, Klebsiella sp. PB12, Klebsiella sp. RCE-7, LMG 2095, NBRC 14940, NCTC 9633
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